Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm16570-201ENSMUST00000161951 436 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm17040-202ENSMUST00000170597 889 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm6905-201ENSMUST00000205729 511 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm44506-201ENSMUST00000206278 965 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm18212-201ENSMUST00000211678 889 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Ntng1-201ENSMUST00000051253 327 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.55□□□□□ -0.56
Trim60Q8VI40 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim60Q8VI40 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.54□□□□□ -0.56
Trim60Q8VI40 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Mir1896-201ENSMUST00000122641 81 ntBASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Gm25125-201ENSMUST00000083340 136 ntBASIC11.54□□□□□ -0.56
Trim60Q8VI40 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim60Q8VI40 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms