Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.99□□□□□ -0.33
Alx1Q8C8B0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm37028-201ENSMUST00000194276 107 ntBASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm37301-201ENSMUST00000195412 568 ntBASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm7880-201ENSMUST00000203748 871 ntBASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Gm18042-201ENSMUST00000219887 790 ntBASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Alx1Q8C8B0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mir1893-201ENSMUST00000122565 83 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mir1905-201ENSMUST00000122779 82 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm5529-201ENSMUST00000165691 891 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm17192-201ENSMUST00000169031 511 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm8492-201ENSMUST00000182375 987 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm26976-201ENSMUST00000182929 908 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm9135-201ENSMUST00000182963 990 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Mir8091-201ENSMUST00000183602 139 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm33080-201ENSMUST00000205429 172 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Gm5805-201ENSMUST00000072779 456 ntBASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx1Q8C8B0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm12795-201ENSMUST00000117594 539 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm24248-201ENSMUST00000157321 322 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx1Q8C8B0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms