Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm45550-201ENSMUST00000209380 946 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm25766-201ENSMUST00000104101 131 ntBASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Snord55-201ENSMUST00000174939 79 ntBASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm30671-201ENSMUST00000214898 318 ntBASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rpp38Q80UU2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rpp38Q80UU2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rpp38Q80UU2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rpp38Q80UU2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms