Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm11244-201ENSMUST00000121243 237 ntBASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Erich3-203ENSMUST00000189969 3460 ntBASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm9550-201ENSMUST00000161130 862 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm18367-201ENSMUST00000176139 600 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Mir6546-201ENSMUST00000184460 62 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Syne3Q4FZC9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12616-201ENSMUST00000118594 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm15615-201ENSMUST00000118876 198 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm22902-201ENSMUST00000158488 302 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12624-201ENSMUST00000177615 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12621-201ENSMUST00000177760 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12615-201ENSMUST00000177970 382 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms