Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm22711-201ENSMUST00000116890 133 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm11244-201ENSMUST00000121243 237 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm44506-201ENSMUST00000206278 965 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.66□□□□□ -0.7
Cdkn2bP55271 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Cdkn2bP55271 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.65□□□□□ -0.7
Cdkn2bP55271 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.65□□□□□ -0.7
Cdkn2bP55271 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdkn2bP55271 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdkn2bP55271 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.65□□□□□ -0.71
Cdkn2bP55271 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdkn2bP55271 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdkn2bP55271 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.65□□□□□ -0.71
Cdkn2bP55271 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdkn2bP55271 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdkn2bP55271 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdkn2bP55271 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdkn2bP55271 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms