Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.41□□□□□ -0.58
SftpbP50405 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SftpbP50405 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SftpbP50405 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
SftpbP50405 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SftpbP50405 Snord17-201ENSMUST00000104526 238 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.4□□□□□ -0.58
SftpbP50405 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gm22846-201ENSMUST00000157706 270 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Gm29499-201ENSMUST00000189151 486 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm28329-201ENSMUST00000191208 689 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm29171-201ENSMUST00000191397 486 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.4□□□□□ -0.58
SftpbP50405 Gm4482-201ENSMUST00000200876 742 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm45186-201ENSMUST00000206874 478 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SftpbP50405 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SftpbP50405 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.4□□□□□ -0.58
SftpbP50405 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SftpbP50405 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SftpbP50405 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SftpbP50405 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
SftpbP50405 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SftpbP50405 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.39□□□□□ -0.59
SftpbP50405 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
SftpbP50405 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.39□□□□□ -0.59
SftpbP50405 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.39□□□□□ -0.59
SftpbP50405 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SftpbP50405 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
SftpbP50405 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SftpbP50405 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.39□□□□□ -0.59
SftpbP50405 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.39□□□□□ -0.59
SftpbP50405 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.39□□□□□ -0.59
SftpbP50405 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms