Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UbbP0CG49 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UbbP0CG49 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
UbbP0CG49 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.74□□□□□ -0.85
UbbP0CG49 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.74□□□□□ -0.85
UbbP0CG49 Rims2-204ENSMUST00000226410 3685 ntBASIC9.74□□□□□ -0.85
UbbP0CG49 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
UbbP0CG49 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Gm12857-201ENSMUST00000117678 592 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.73□□□□□ -0.85
UbbP0CG49 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.73□□□□□ -0.85
UbbP0CG49 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
UbbP0CG49 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Gm37597-201ENSMUST00000191853 382 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 Gm38151-201ENSMUST00000195085 289 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 Gm9353-201ENSMUST00000200472 604 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 Gm45856-201ENSMUST00000212752 416 ntBASIC9.73□□□□□ -0.85
UbbP0CG49 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UbbP0CG49 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
UbbP0CG49 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm13392-201ENSMUST00000117708 150 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Gm14381-201ENSMUST00000122105 414 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.72□□□□□ -0.85
UbbP0CG49 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm28071-201ENSMUST00000190355 478 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Gm45865-201ENSMUST00000211815 945 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Cts7-204ENSMUST00000225321 1257 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.72□□□□□ -0.85
UbbP0CG49 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
UbbP0CG49 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UbbP0CG49 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.72□□□□□ -0.85
UbbP0CG49 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms