Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Snord17-201ENSMUST00000104526 238 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm25492-201ENSMUST00000157383 129 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm23045-201ENSMUST00000175041 96 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Mir5132-201ENSMUST00000175166 71 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm17831-201ENSMUST00000205579 900 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 AC102542.1-201ENSMUST00000225204 1138 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Gm43980-201ENSMUST00000204899 1612 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.38□□□□□ -0.59
PdgfrbP05622 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdgfrbP05622 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PdgfrbP05622 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
PdgfrbP05622 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm22709-201ENSMUST00000116893 111 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm22846-201ENSMUST00000157706 270 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC11.37□□□□□ -0.59
PdgfrbP05622 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm26461-201ENSMUST00000175064 290 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm21778-201ENSMUST00000178779 471 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC11.37□□□□□ -0.59
PdgfrbP05622 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm6562-201ENSMUST00000221903 464 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.37□□□□□ -0.59
PdgfrbP05622 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PdgfrbP05622 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdgfrbP05622 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms