Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
P04224 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
P04224 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.79□□□□□ -0.84
P04224 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.79□□□□□ -0.84
P04224 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.79□□□□□ -0.84
P04224 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.79□□□□□ -0.84
P04224 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
P04224 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.79□□□□□ -0.84
P04224 Gm15370-201ENSMUST00000117158 253 ntBASIC9.79□□□□□ -0.84
P04224 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm13297-201ENSMUST00000120205 934 ntBASIC9.79□□□□□ -0.84
P04224 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.79□□□□□ -0.84
P04224 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.79□□□□□ -0.84
P04224 Gm15547-201ENSMUST00000122152 333 ntBASIC9.79□□□□□ -0.84
P04224 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.79□□□□□ -0.84
P04224 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm9192-201ENSMUST00000183221 985 ntBASIC9.79□□□□□ -0.84
P04224 Gm29396-201ENSMUST00000185659 716 ntBASIC9.79□□□□□ -0.84
P04224 Gm6439-201ENSMUST00000199849 862 ntBASIC9.79□□□□□ -0.84
P04224 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
P04224 Gm30285-201ENSMUST00000214614 422 ntBASIC9.79□□□□□ -0.84
P04224 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.79□□□□□ -0.84
P04224 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.79□□□□□ -0.84
P04224 Gm8712-201ENSMUST00000221090 701 ntBASIC9.79□□□□□ -0.84
P04224 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.79□□□□□ -0.84
P04224 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
P04224 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.79□□□□□ -0.84
P04224 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
P04224 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.79□□□□□ -0.84
P04224 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
P04224 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.79□□□□□ -0.84
P04224 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
P04224 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
P04224 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
P04224 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.78□□□□□ -0.84
P04224 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
P04224 Gm14644-201ENSMUST00000116671 647 ntBASIC9.78□□□□□ -0.84
P04224 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
P04224 Gm13786-201ENSMUST00000122371 333 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms