Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm23596-201ENSMUST00000104304 132 ntBASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm13996-201ENSMUST00000118456 430 ntBASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pcdh1F7BJK1 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm8913-201ENSMUST00000209491 641 ntBASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pcdh1F7BJK1 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms