Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.22■□□□□ 0.03
Rtn4Q99P72 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Gm42858-201ENSMUST00000202512 1704 ntBASIC15.22■□□□□ 0.03
Rtn4Q99P72 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Zfp983-201ENSMUST00000039726 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn4Q99P72 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm14263-201ENSMUST00000117955 746 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm12266-201ENSMUST00000120311 962 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm16363-201ENSMUST00000132460 877 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm17040-202ENSMUST00000170597 889 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm28356-202ENSMUST00000187566 858 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm8959-201ENSMUST00000213150 571 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 AL672010.1-201ENSMUST00000215182 1246 ntBASIC15.21■□□□□ 0.03
Rtn4Q99P72 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Rtn4Q99P72 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4Q99P72 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
Rtn4Q99P72 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4Q99P72 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4Q99P72 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4Q99P72 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm3931-201ENSMUST00000119038 455 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm15188-201ENSMUST00000121264 704 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm11389-201ENSMUST00000121407 430 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm22334-201ENSMUST00000158070 133 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtn4Q99P72 AC147615.1-201ENSMUST00000218914 441 ntBASIC15.2■□□□□ 0.02
Rtn4Q99P72 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4Q99P72 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms