Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.87□□□□□ -0.51
Clp1Q99LI9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm11380-201ENSMUST00000118067 560 ntBASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.87□□□□□ -0.51
Clp1Q99LI9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.87□□□□□ -0.51
Clp1Q99LI9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm13333-201ENSMUST00000119424 781 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm24078-201ENSMUST00000158184 103 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.86□□□□□ -0.51
Clp1Q99LI9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clp1Q99LI9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clp1Q99LI9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms