Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm5070-201ENSMUST00000177599 862 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm9230-201ENSMUST00000188228 532 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 AA914427-201ENSMUST00000193194 1166 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm44967-201ENSMUST00000207047 631 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 AC154532.1-201ENSMUST00000227860 965 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tsen54Q8C2A2 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm6963-201ENSMUST00000147879 379 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm4857-201ENSMUST00000192718 785 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Rprl1-202ENSMUST00000198476 238 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm19187-201ENSMUST00000206781 892 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Gzmn-202ENSMUST00000225535 989 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tsen54Q8C2A2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms