Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm12028-201ENSMUST00000118065 436 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm16209-201ENSMUST00000118457 627 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm6441-201ENSMUST00000120983 696 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm10171-201ENSMUST00000126220 628 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Mir6359-201ENSMUST00000183668 81 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm27316-201ENSMUST00000184884 277 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm35960-201ENSMUST00000202712 767 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gm10233-201ENSMUST00000089275 628 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Mir1893-201ENSMUST00000122565 83 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Gm16305-201ENSMUST00000140747 556 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Gm5254-201ENSMUST00000188353 977 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Gm33707-201ENSMUST00000195135 569 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx55Q6ZPL9 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms