Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14460-201ENSMUST00000121511 639 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm14363-201ENSMUST00000122304 409 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm19287-201ENSMUST00000203190 358 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm8956-201ENSMUST00000203939 825 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm9797-202ENSMUST00000218003 294 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Sh3rf1Q69ZI1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.4□□□□□ -0.59
Sh3rf1Q69ZI1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm11663-201ENSMUST00000117888 290 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm15881-201ENSMUST00000148792 942 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm8365-201ENSMUST00000197334 648 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Gm45219-201ENSMUST00000205602 465 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh3rf1Q69ZI1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf1Q69ZI1 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms