Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC10.19□□□□□ -0.78
VcanQ62059 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.19□□□□□ -0.78
VcanQ62059 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.19□□□□□ -0.78
VcanQ62059 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
VcanQ62059 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VcanQ62059 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.18□□□□□ -0.78
VcanQ62059 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm18443-201ENSMUST00000185358 556 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm38004-201ENSMUST00000192972 357 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.18□□□□□ -0.78
VcanQ62059 AC160109.1-201ENSMUST00000225592 729 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
VcanQ62059 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm8806-201ENSMUST00000120076 1407 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VcanQ62059 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.18□□□□□ -0.78
VcanQ62059 Scgb1b21-201ENSMUST00000170232 268 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm6457-201ENSMUST00000066378 815 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm8864-201ENSMUST00000118653 1010 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.18□□□□□ -0.78
VcanQ62059 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC10.18□□□□□ -0.78
VcanQ62059 Gm38063-201ENSMUST00000193990 342 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Gm43674-201ENSMUST00000196313 791 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.18□□□□□ -0.78
VcanQ62059 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.18□□□□□ -0.78
VcanQ62059 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VcanQ62059 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.17□□□□□ -0.78
VcanQ62059 Gm43761-201ENSMUST00000202132 991 ntBASIC10.17□□□□□ -0.78
VcanQ62059 Gm7812-201ENSMUST00000203479 874 ntBASIC10.17□□□□□ -0.78
VcanQ62059 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.17□□□□□ -0.78
VcanQ62059 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.17□□□□□ -0.78
VcanQ62059 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
VcanQ62059 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
VcanQ62059 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms