Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm6038-201ENSMUST00000154310 948 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm40414-201ENSMUST00000197608 481 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm14997-201ENSMUST00000119232 636 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm14231-201ENSMUST00000120090 592 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm22763-201ENSMUST00000158374 107 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm25591-201ENSMUST00000177317 94 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 BB187690-201ENSMUST00000198619 1176 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm7242-201ENSMUST00000221134 705 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm16477-201ENSMUST00000085365 801 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Gm17415-201ENSMUST00000096427 789 ntBASIC13.16□□□□□ -0.3
Col5a2Q3U962 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col5a2Q3U962 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.15□□□□□ -0.3
Col5a2Q3U962 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.15□□□□□ -0.3
Col5a2Q3U962 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm38038-201ENSMUST00000193803 259 ntBASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm44388-201ENSMUST00000204350 258 ntBASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col5a2Q3U962 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col5a2Q3U962 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col5a2Q3U962 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col5a2Q3U962 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col5a2Q3U962 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col5a2Q3U962 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col5a2Q3U962 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col5a2Q3U962 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms