Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm8302-201ENSMUST00000119217 852 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm12274-201ENSMUST00000120062 385 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm15549-201ENSMUST00000121595 622 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm25072-201ENSMUST00000175233 235 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm8531-201ENSMUST00000188319 893 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm45594-201ENSMUST00000211717 241 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.63□□□□□ -0.71
Nkx3-2P97503 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx3-2P97503 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.62□□□□□ -0.71
Nkx3-2P97503 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.62□□□□□ -0.71
Nkx3-2P97503 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Gm14071-201ENSMUST00000117817 509 ntBASIC10.62□□□□□ -0.71
Nkx3-2P97503 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Gm25492-201ENSMUST00000157383 129 ntBASIC10.62□□□□□ -0.71
Nkx3-2P97503 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx3-2P97503 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms