Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm5292-201ENSMUST00000073317 580 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm45885-202ENSMUST00000211520 1383 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm7961-201ENSMUST00000201338 1436 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm37082-201ENSMUST00000192629 1927 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm43149-201ENSMUST00000198162 1422 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm9575-201ENSMUST00000122140 1339 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm13117-201ENSMUST00000120894 691 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm6612-201ENSMUST00000170777 395 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm9162-201ENSMUST00000182081 991 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm6606-201ENSMUST00000193613 947 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm43852-201ENSMUST00000202098 917 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Gm2448-201ENSMUST00000207080 559 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 AC154484.1-201ENSMUST00000227311 771 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxb3P09026 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hoxb3P09026 Paupar-201ENSMUST00000194826 3482 ntBASIC11.47□□□□□ -0.57
Hoxb3P09026 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxb3P09026 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm37891-201ENSMUST00000195585 1326 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm16418-201ENSMUST00000118577 171 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm10169-201ENSMUST00000121822 348 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms