Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P06323 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.06□□□□□ -0.96
P06323 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Gm12501-201ENSMUST00000119163 529 ntBASIC9.06□□□□□ -0.96
P06323 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.06□□□□□ -0.96
P06323 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.06□□□□□ -0.96
P06323 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.06□□□□□ -0.96
P06323 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.06□□□□□ -0.96
P06323 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.06□□□□□ -0.96
P06323 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
P06323 Gm16505-201ENSMUST00000179981 232 ntBASIC9.06□□□□□ -0.96
P06323 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.06□□□□□ -0.96
P06323 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.06□□□□□ -0.96
P06323 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
P06323 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.06□□□□□ -0.96
P06323 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
P06323 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.06□□□□□ -0.96
P06323 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.06□□□□□ -0.96
P06323 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
P06323 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.06□□□□□ -0.96
P06323 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.06□□□□□ -0.96
P06323 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P06323 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.05□□□□□ -0.96
P06323 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
P06323 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
P06323 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.05□□□□□ -0.96
P06323 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Gm13916-201ENSMUST00000117368 628 ntBASIC9.05□□□□□ -0.96
P06323 Gm13263-201ENSMUST00000121271 838 ntBASIC9.05□□□□□ -0.96
P06323 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
P06323 Gm23085-201ENSMUST00000157849 293 ntBASIC9.05□□□□□ -0.96
P06323 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Gm7003-201ENSMUST00000195089 312 ntBASIC9.05□□□□□ -0.96
P06323 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.05□□□□□ -0.96
P06323 Gm6867-201ENSMUST00000219165 425 ntBASIC9.05□□□□□ -0.96
P06323 Gm6722-201ENSMUST00000221586 390 ntBASIC9.05□□□□□ -0.96
P06323 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
P06323 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
P06323 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms