Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Hoxa7P02830 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa7P02830 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.52□□□□□ -0.25
Hoxa7P02830 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.52□□□□□ -0.25
Hoxa7P02830 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa7P02830 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Hoxa7P02830 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa7P02830 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm13019-201ENSMUST00000120000 276 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm24514-201ENSMUST00000174961 285 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm37299-201ENSMUST00000193951 826 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm5865-201ENSMUST00000198713 637 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm45550-201ENSMUST00000209380 946 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm9132-201ENSMUST00000210182 832 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa7P02830 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa7P02830 Gm10699-201ENSMUST00000098916 2130 ntBASIC13.51□□□□□ -0.25
Hoxa7P02830 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa7P02830 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm11331-201ENSMUST00000119764 288 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Snord55-201ENSMUST00000174939 79 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm9211-201ENSMUST00000182882 975 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm37852-201ENSMUST00000193027 350 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm43163-201ENSMUST00000196571 442 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm8162-201ENSMUST00000213951 665 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.5□□□□□ -0.25
Hoxa7P02830 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Hoxa7P02830 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa7P02830 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hoxa7P02830 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa7P02830 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa7P02830 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa7P02830 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa7P02830 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms