Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Gm37737-201ENSMUST00000195013 1638 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 AC154528.2-201ENSMUST00000228432 3023 ntBASIC8.15□□□□□ -1.1
TcraP01849 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 CT009601.1-201ENSMUST00000225567 2705 ntBASIC8.15□□□□□ -1.1
TcraP01849 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC8.15□□□□□ -1.1
TcraP01849 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.15□□□□□ -1.1
TcraP01849 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gm28882-201ENSMUST00000185504 314 ntBASIC8.15□□□□□ -1.1
TcraP01849 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
TcraP01849 Gm38002-201ENSMUST00000193255 180 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gm18893-201ENSMUST00000198416 943 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gm43966-201ENSMUST00000203301 612 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.15□□□□□ -1.1
TcraP01849 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
TcraP01849 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC8.15□□□□□ -1.11
TcraP01849 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
TcraP01849 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TcraP01849 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
TcraP01849 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC8.15□□□□□ -1.11
TcraP01849 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
TcraP01849 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Nln-205ENSMUST00000224945 2486 ntBASIC8.14□□□□□ -1.11
TcraP01849 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
TcraP01849 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.14□□□□□ -1.11
TcraP01849 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.14□□□□□ -1.11
TcraP01849 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.14□□□□□ -1.11
TcraP01849 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Gm6203-201ENSMUST00000209575 1342 ntBASIC8.14□□□□□ -1.11
TcraP01849 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TcraP01849 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC8.14□□□□□ -1.11
TcraP01849 Gm12742-201ENSMUST00000117326 410 ntBASIC8.14□□□□□ -1.11
TcraP01849 Gm13875-201ENSMUST00000120162 282 ntBASIC8.14□□□□□ -1.11
TcraP01849 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms