Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
Hcn1O88704 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Hcn1O88704 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.75□□□□□ -0.69
Hcn1O88704 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hcn1O88704 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.75□□□□□ -0.69
Hcn1O88704 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hcn1O88704 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hcn1O88704 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.75□□□□□ -0.69
Hcn1O88704 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hcn1O88704 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Hcn1O88704 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hcn1O88704 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm14193-201ENSMUST00000105067 153 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Mir1943-201ENSMUST00000158276 73 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Gm12407-201ENSMUST00000180219 324 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm45118-201ENSMUST00000208928 825 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Hcn1O88704 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Hcn1O88704 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hcn1O88704 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hcn1O88704 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.74□□□□□ -0.69
Hcn1O88704 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.73□□□□□ -0.69
Hcn1O88704 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Gm22920-201ENSMUST00000102175 109 ntBASIC10.73□□□□□ -0.69
Hcn1O88704 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.73□□□□□ -0.69
Hcn1O88704 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Hcn1O88704 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hcn1O88704 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hcn1O88704 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms