Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm44498-201ENSMUST00000199509 111 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm5764-201ENSMUST00000118817 885 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gm11993-201ENSMUST00000121861 820 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gm18010-201ENSMUST00000203553 202 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gm18001-201ENSMUST00000212023 688 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.38□□□□□ -0.43
Scn3aA2ASI5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm13094-201ENSMUST00000117930 409 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Gm27440-201ENSMUST00000184785 107 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn3aA2ASI5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms