Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm6612-201ENSMUST00000170777 395 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm38247-201ENSMUST00000194675 433 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.89□□□□□ -0.51
Clp1Q99LI9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clp1Q99LI9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm8019-201ENSMUST00000119317 587 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm26313-201ENSMUST00000157770 308 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm24312-201ENSMUST00000178677 119 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm7572-201ENSMUST00000182616 766 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm37723-201ENSMUST00000194480 565 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm9353-201ENSMUST00000200472 604 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm18001-201ENSMUST00000212023 688 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.88□□□□□ -0.51
Clp1Q99LI9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clp1Q99LI9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.87□□□□□ -0.51
Clp1Q99LI9 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms