Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Mir6420-201ENSMUST00000185032 102 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm6905-201ENSMUST00000205729 511 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm45597-201ENSMUST00000211524 1994 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm22920-201ENSMUST00000102175 109 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm37835-201ENSMUST00000193305 361 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm7848-201ENSMUST00000210739 718 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc38Q8CDN8 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc38Q8CDN8 Snord17-201ENSMUST00000104526 238 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 226 ms