Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm12015-201ENSMUST00000117065 843 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm25890-201ENSMUST00000177643 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm22614-201ENSMUST00000178300 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm38317-201ENSMUST00000195564 343 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm18711-201ENSMUST00000199341 750 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm9996-201ENSMUST00000070359 913 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm22042-201ENSMUST00000082989 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Gm26110-201ENSMUST00000083971 165 ntBASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tsen54Q8C2A2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm13665-201ENSMUST00000120830 528 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm44651-201ENSMUST00000207343 372 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm17931-201ENSMUST00000208132 634 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tsen54Q8C2A2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms