Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm12196-201ENSMUST00000120954 262 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm2965-201ENSMUST00000198365 343 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm6108-201ENSMUST00000208365 367 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm6722-201ENSMUST00000221586 390 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smarcd3Q6P9Z1 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smarcd3Q6P9Z1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm8459-201ENSMUST00000162504 760 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm9353-201ENSMUST00000200472 604 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm10288-201ENSMUST00000084614 537 ntBASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smarcd3Q6P9Z1 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms