Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TPM4P67936 AC004890.2-204ENST00000481968 304 ntBASIC16.2■□□□□ 0.18
TPM4P67936 MESTP3-201ENST00000503460 968 ntBASIC16.2■□□□□ 0.18
TPM4P67936 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM4P67936 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.2■□□□□ 0.18
TPM4P67936 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
TPM4P67936 AC093726.1-201ENST00000608064 963 ntBASIC16.2■□□□□ 0.18
TPM4P67936 BAP1-211ENST00000615113 489 ntBASIC16.2■□□□□ 0.18
TPM4P67936 AC093028.1-201ENST00000622998 982 ntBASIC16.2■□□□□ 0.18
TPM4P67936 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TPM4P67936 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TPM4P67936 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.2■□□□□ 0.18
TPM4P67936 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TPM4P67936 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 AL022313.4-201ENST00000562756 2046 ntBASIC16.19■□□□□ 0.18
TPM4P67936 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TPM4P67936 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 AL161932.2-201ENST00000435436 679 ntBASIC16.19■□□□□ 0.18
TPM4P67936 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.19■□□□□ 0.18
TPM4P67936 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.19■□□□□ 0.18
TPM4P67936 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.19■□□□□ 0.18
TPM4P67936 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.19■□□□□ 0.18
TPM4P67936 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TPM4P67936 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TPM4P67936 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 AC083964.2-201ENST00000623988 2396 ntBASIC16.19■□□□□ 0.18
TPM4P67936 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TPM4P67936 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TPM4P67936 CLUHP2-201ENST00000426660 1303 ntBASIC16.19■□□□□ 0.18
TPM4P67936 FKBP4P6-201ENST00000457486 1332 ntBASIC16.19■□□□□ 0.18
TPM4P67936 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TPM4P67936 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.19■□□□□ 0.18
TPM4P67936 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM4P67936 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 AC020910.5-201ENST00000623668 1865 ntBASIC16.18■□□□□ 0.18
TPM4P67936 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM4P67936 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TPM4P67936 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.18■□□□□ 0.18
TPM4P67936 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM4P67936 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.18■□□□□ 0.18
TPM4P67936 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM4P67936 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM4P67936 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms