Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
GdnfP48540 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
GdnfP48540 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.91□□□□□ -0.82
GdnfP48540 Gm14208-201ENSMUST00000119645 678 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.91□□□□□ -0.82
GdnfP48540 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.91□□□□□ -0.82
GdnfP48540 Gm24749-201ENSMUST00000157838 343 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Gm5616-201ENSMUST00000165252 384 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.91□□□□□ -0.82
GdnfP48540 Gm8741-201ENSMUST00000174736 384 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm44548-201ENSMUST00000208929 192 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Gm9257-201ENSMUST00000221254 232 ntBASIC9.91□□□□□ -0.82
GdnfP48540 CT009713.1-201ENSMUST00000224828 853 ntBASIC9.91□□□□□ -0.82
GdnfP48540 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.91□□□□□ -0.82
GdnfP48540 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.91□□□□□ -0.82
GdnfP48540 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.91□□□□□ -0.82
GdnfP48540 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.91□□□□□ -0.82
GdnfP48540 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.9□□□□□ -0.82
GdnfP48540 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
GdnfP48540 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
GdnfP48540 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.9□□□□□ -0.82
GdnfP48540 Gm5708-201ENSMUST00000196289 886 ntBASIC9.9□□□□□ -0.82
GdnfP48540 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.9□□□□□ -0.82
GdnfP48540 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
GdnfP48540 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Gm45186-201ENSMUST00000206874 478 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Gm45433-201ENSMUST00000209386 247 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
GdnfP48540 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.9□□□□□ -0.82
GdnfP48540 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.9□□□□□ -0.82
GdnfP48540 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
GdnfP48540 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
GdnfP48540 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
GdnfP48540 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
GdnfP48540 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.9□□□□□ -0.83
GdnfP48540 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.9□□□□□ -0.83
GdnfP48540 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
GdnfP48540 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
GdnfP48540 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
GdnfP48540 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms