Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13899-201ENSMUST00000121519 1255 ntBASIC13.37□□□□□ -0.27
Rfx1P48377 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.37□□□□□ -0.27
Rfx1P48377 Gm38317-201ENSMUST00000195564 343 ntBASIC13.37□□□□□ -0.27
Rfx1P48377 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.37□□□□□ -0.27
Rfx1P48377 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm43372-201ENSMUST00000202662 3016 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm45161-201ENSMUST00000207316 2263 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm12857-201ENSMUST00000117678 592 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.36□□□□□ -0.27
Rfx1P48377 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm26047-201ENSMUST00000157308 113 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Gm8459-201ENSMUST00000162504 760 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm3332-201ENSMUST00000189337 928 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm26047-202ENSMUST00000198840 115 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Gm8913-201ENSMUST00000209491 641 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Gm6867-201ENSMUST00000219165 425 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfx1P48377 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.36□□□□□ -0.27
Rfx1P48377 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfx1P48377 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Gm19040-201ENSMUST00000203280 4726 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Rfx1P48377 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 Gm24255-201ENSMUST00000104481 128 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rfx1P48377 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Rfx1P48377 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Gm15617-201ENSMUST00000118973 771 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfx1P48377 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfx1P48377 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Olfml3-204ENSMUST00000169286 874 ntBASIC13.35□□□□□ -0.27
Rfx1P48377 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx1P48377 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx1P48377 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Rfx1P48377 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx1P48377 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms