Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Snord23-201ENSMUST00000116828 109 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm16219-201ENSMUST00000120096 274 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm10169-201ENSMUST00000121822 348 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm12628-201ENSMUST00000122193 382 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.34□□□□□ -0.91
Col8a2P25318 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.34□□□□□ -0.91
Col8a2P25318 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm42518-201ENSMUST00000196277 938 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Col8a2P25318 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.34□□□□□ -0.91
Col8a2P25318 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col8a2P25318 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.34□□□□□ -0.91
Col8a2P25318 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
Col8a2P25318 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.33□□□□□ -0.92
Col8a2P25318 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.33□□□□□ -0.92
Col8a2P25318 Gm6407-201ENSMUST00000176468 549 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Gm43058-201ENSMUST00000197645 625 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.33□□□□□ -0.92
Col8a2P25318 Gm3726-201ENSMUST00000203110 785 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Gm7082-201ENSMUST00000209880 969 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col8a2P25318 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col8a2P25318 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.33□□□□□ -0.92
Col8a2P25318 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms