Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm12795-201ENSMUST00000117594 539 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm15329-201ENSMUST00000121408 155 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxa3P02831 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxa3P02831 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm8492-201ENSMUST00000182375 987 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxa3P02831 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm37028-201ENSMUST00000194276 107 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm45594-201ENSMUST00000211717 241 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.44□□□□□ -0.9
Hoxa3P02831 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.44□□□□□ -0.9
Hoxa3P02831 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxa3P02831 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Hoxa3P02831 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm25766-201ENSMUST00000104101 131 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm14395-201ENSMUST00000120494 563 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm25492-201ENSMUST00000157383 129 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm24398-201ENSMUST00000157870 109 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm15744-201ENSMUST00000161734 213 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm18065-201ENSMUST00000221395 526 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Gm19009-201ENSMUST00000223072 823 ntBASIC9.43□□□□□ -0.9
Hoxa3P02831 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms