Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Mospd4-201ENSMUST00000180618 576 ntBASIC8.17□□□□□ -1.1
TcraP01849 Gm2546-201ENSMUST00000182630 991 ntBASIC8.17□□□□□ -1.1
TcraP01849 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Gm27514-201ENSMUST00000183692 110 ntBASIC8.17□□□□□ -1.1
TcraP01849 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC8.17□□□□□ -1.1
TcraP01849 Gm37489-201ENSMUST00000191883 159 ntBASIC8.17□□□□□ -1.1
TcraP01849 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC8.17□□□□□ -1.1
TcraP01849 Gm42627-201ENSMUST00000197347 224 ntBASIC8.17□□□□□ -1.1
TcraP01849 Gm43133-201ENSMUST00000197472 463 ntBASIC8.17□□□□□ -1.1
TcraP01849 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.17□□□□□ -1.1
TcraP01849 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Gm45597-201ENSMUST00000211524 1994 ntBASIC8.17□□□□□ -1.1
TcraP01849 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.17□□□□□ -1.1
TcraP01849 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Gm5419-201ENSMUST00000119301 527 ntBASIC8.16□□□□□ -1.1
TcraP01849 Gm4986-201ENSMUST00000119731 549 ntBASIC8.16□□□□□ -1.1
TcraP01849 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC8.16□□□□□ -1.1
TcraP01849 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC8.16□□□□□ -1.1
TcraP01849 Gm45880-201ENSMUST00000213041 853 ntBASIC8.16□□□□□ -1.1
TcraP01849 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.16□□□□□ -1.1
TcraP01849 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
TcraP01849 AC140451.2-201ENSMUST00000228030 664 ntBASIC8.16□□□□□ -1.1
TcraP01849 AC129931.1-201ENSMUST00000228865 1861 ntBASIC8.16□□□□□ -1.1
TcraP01849 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
TcraP01849 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
TcraP01849 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TcraP01849 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TcraP01849 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms