Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atg4a-psA0A0G2JFS9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.58□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.58□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm25766-201ENSMUST00000104101 131 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Snord55-201ENSMUST00000174939 79 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Mir7076-201ENSMUST00000183519 74 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm10020-201ENSMUST00000081993 612 ntBASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.57□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm12986-201ENSMUST00000119037 967 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm15197-201ENSMUST00000120526 478 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm1848-201ENSMUST00000120711 789 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm28032-201ENSMUST00000184104 96 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm44158-201ENSMUST00000203881 505 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm2875-201ENSMUST00000211333 360 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Id2-203ENSMUST00000222667 958 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atg4a-psA0A0G2JFS9 Gm12663-201ENSMUST00000118481 958 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms