Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Alx1Q8C8B0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Mir453-201ENSMUST00000104732 82 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm16030-201ENSMUST00000159098 603 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm9081-201ENSMUST00000182346 991 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm45219-201ENSMUST00000205602 465 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm16380-201ENSMUST00000077997 478 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Alx1Q8C8B0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm12389-201ENSMUST00000117696 418 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm13019-201ENSMUST00000120000 276 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Mir7032-201ENSMUST00000185154 79 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm25125-201ENSMUST00000083340 136 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm7589-201ENSMUST00000085631 534 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.05□□□□□ -0.32
Alx1Q8C8B0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.05□□□□□ -0.32
Alx1Q8C8B0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Alx1Q8C8B0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms