Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a2Q64739 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a2Q64739 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.32□□□□□ -0.28
Col11a2Q64739 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Col11a2Q64739 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a2Q64739 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a2Q64739 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col11a2Q64739 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 A1cf-204ENSMUST00000224564 1432 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm8464-202ENSMUST00000146697 1142 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm4750-201ENSMUST00000151942 1142 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm20474-201ENSMUST00000180089 596 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm38038-201ENSMUST00000193803 259 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm6008-201ENSMUST00000206542 874 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 CT009550.1-201ENSMUST00000225750 864 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 AC154640.1-203ENSMUST00000228316 1618 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 AC124561.1-202ENSMUST00000228652 1929 ntBASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col11a2Q64739 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Col11a2Q64739 Gm8482-201ENSMUST00000117972 471 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm13841-201ENSMUST00000118829 483 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm11449-201ENSMUST00000119175 476 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm15793-201ENSMUST00000121857 495 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm8210-201ENSMUST00000178557 483 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm15454-201ENSMUST00000179718 483 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm17799-201ENSMUST00000183270 667 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Mir6396-201ENSMUST00000183603 111 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm6344-201ENSMUST00000075962 483 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Col11a2Q64739 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm14370-201ENSMUST00000122460 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm15273-201ENSMUST00000142302 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm7023-201ENSMUST00000147295 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm14357-201ENSMUST00000178352 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm14361-201ENSMUST00000178547 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm14348-201ENSMUST00000179183 868 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm7539-201ENSMUST00000189789 630 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm19090-201ENSMUST00000218187 774 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.3□□□□□ -0.28
Col11a2Q64739 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col11a2Q64739 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col11a2Q64739 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms