Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lhx3P50481 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lhx3P50481 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lhx3P50481 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lhx3P50481 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Snord23-201ENSMUST00000116828 109 ntBASIC11.36□□□□□ -0.59
Lhx3P50481 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.36□□□□□ -0.59
Lhx3P50481 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.36□□□□□ -0.59
Lhx3P50481 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm7600-201ENSMUST00000209657 785 ntBASIC11.36□□□□□ -0.59
Lhx3P50481 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.36□□□□□ -0.59
Lhx3P50481 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lhx3P50481 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.36□□□□□ -0.59
Lhx3P50481 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lhx3P50481 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lhx3P50481 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm14270-201ENSMUST00000118388 846 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Gm9673-201ENSMUST00000119287 781 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm25072-201ENSMUST00000175233 235 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.35□□□□□ -0.59
Lhx3P50481 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.35□□□□□ -0.59
Lhx3P50481 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Lhx3P50481 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms