Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm15808-201ENSMUST00000119046 604 ntBASIC9.93□□□□□ -0.82
GdnfP48540 Gm11960-201ENSMUST00000122068 925 ntBASIC9.93□□□□□ -0.82
GdnfP48540 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Gm4857-201ENSMUST00000192718 785 ntBASIC9.93□□□□□ -0.82
GdnfP48540 Gm7003-201ENSMUST00000195089 312 ntBASIC9.93□□□□□ -0.82
GdnfP48540 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.93□□□□□ -0.82
GdnfP48540 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.93□□□□□ -0.82
GdnfP48540 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.93□□□□□ -0.82
GdnfP48540 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
GdnfP48540 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
GdnfP48540 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.92□□□□□ -0.82
GdnfP48540 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.92□□□□□ -0.82
GdnfP48540 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm14539-201ENSMUST00000117527 174 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Gm14130-201ENSMUST00000118417 987 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.92□□□□□ -0.82
GdnfP48540 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.92□□□□□ -0.82
GdnfP48540 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
GdnfP48540 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.92□□□□□ -0.82
GdnfP48540 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.92□□□□□ -0.82
GdnfP48540 Gm37666-201ENSMUST00000194110 866 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC9.92□□□□□ -0.82
GdnfP48540 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.92□□□□□ -0.82
GdnfP48540 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
GdnfP48540 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.92□□□□□ -0.82
GdnfP48540 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
GdnfP48540 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
GdnfP48540 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
GdnfP48540 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
GdnfP48540 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.91□□□□□ -0.82
GdnfP48540 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
GdnfP48540 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms