Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm15566-201ENSMUST00000121130 590 ntBASIC13.78□□□□□ -0.2
Nkx1-2P42580 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm24844-201ENSMUST00000158679 127 ntBASIC13.78□□□□□ -0.2
Nkx1-2P42580 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm28450-201ENSMUST00000187349 638 ntBASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm17825-201ENSMUST00000206836 794 ntBASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.78□□□□□ -0.2
Nkx1-2P42580 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx1-2P42580 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx1-2P42580 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx1-2P42580 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.77□□□□□ -0.2
Nkx1-2P42580 Rgr-203ENSMUST00000225070 4704 ntBASIC13.77□□□□□ -0.2
Nkx1-2P42580 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx1-2P42580 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx1-2P42580 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm22711-201ENSMUST00000116890 133 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm12247-201ENSMUST00000117585 670 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm15617-201ENSMUST00000118973 771 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm14277-201ENSMUST00000121195 360 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm24990-201ENSMUST00000157406 323 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm12407-201ENSMUST00000180219 324 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.77□□□□□ -0.21
Nkx1-2P42580 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx1-2P42580 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm14058-201ENSMUST00000116082 735 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm13809-201ENSMUST00000117921 597 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm15329-201ENSMUST00000121408 155 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm29499-201ENSMUST00000189151 486 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm28329-201ENSMUST00000191208 689 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm29171-201ENSMUST00000191397 486 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm45856-201ENSMUST00000212752 416 ntBASIC13.76□□□□□ -0.21
Nkx1-2P42580 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx1-2P42580 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms