Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.05□□□□□ -0.32
Col1a1P11087 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col1a1P11087 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.05□□□□□ -0.32
Col1a1P11087 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Col1a1P11087 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col1a1P11087 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm13192-201ENSMUST00000101199 208 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm10443-201ENSMUST00000119024 210 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm6238-201ENSMUST00000120999 465 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm16441-201ENSMUST00000138176 924 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm6038-201ENSMUST00000154310 948 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm29543-201ENSMUST00000188138 967 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm20568-201ENSMUST00000197129 208 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.04□□□□□ -0.32
Col1a1P11087 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col1a1P11087 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col1a1P11087 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm14592-201ENSMUST00000117201 560 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.04□□□□□ -0.32
Col1a1P11087 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col1a1P11087 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Gm8162-201ENSMUST00000213951 665 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.04□□□□□ -0.32
Col1a1P11087 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col1a1P11087 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm11919-201ENSMUST00000117609 721 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Gm13281-201ENSMUST00000120871 567 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col1a1P11087 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm3527-201ENSMUST00000198905 460 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm8170-201ENSMUST00000218581 945 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Gm18042-201ENSMUST00000219887 790 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.03□□□□□ -0.32
Col1a1P11087 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col1a1P11087 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col1a1P11087 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col1a1P11087 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col1a1P11087 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col1a1P11087 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms