Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm14193-201ENSMUST00000105067 153 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm11956-201ENSMUST00000119525 512 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm13460-201ENSMUST00000121274 353 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm12327-201ENSMUST00000121729 1168 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm4726-201ENSMUST00000135604 736 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm6019-201ENSMUST00000148369 736 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Esd-ps-201ENSMUST00000170684 847 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm17711-201ENSMUST00000172028 237 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm9540-201ENSMUST00000188230 478 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm9136-201ENSMUST00000193368 454 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.06□□□□□ -0.96
Hoxd3P09027 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm17831-201ENSMUST00000205579 900 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm44559-201ENSMUST00000207177 1012 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm45113-201ENSMUST00000207518 165 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm6108-201ENSMUST00000208365 367 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm10179-201ENSMUST00000086233 688 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxd3P09027 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
Hoxd3P09027 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.06□□□□□ -0.96
Hoxd3P09027 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.05□□□□□ -0.96
Hoxd3P09027 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.05□□□□□ -0.96
Hoxd3P09027 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.05□□□□□ -0.96
Hoxd3P09027 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.05□□□□□ -0.96
Hoxd3P09027 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxd3P09027 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxd3P09027 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms