Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TcraP01849 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TcraP01849 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TcraP01849 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
TcraP01849 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TcraP01849 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TcraP01849 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TcraP01849 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TcraP01849 Gm18210-201ENSMUST00000209001 1524 ntBASIC8.19□□□□□ -1.1
TcraP01849 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC8.18□□□□□ -1.1
TcraP01849 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TcraP01849 Gm12463-201ENSMUST00000118271 849 ntBASIC8.18□□□□□ -1.1
TcraP01849 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC8.18□□□□□ -1.1
TcraP01849 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.18□□□□□ -1.1
TcraP01849 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Ap1g1-206ENSMUST00000179104 1096 ntBASIC8.18□□□□□ -1.1
TcraP01849 Gm5597-201ENSMUST00000182353 1193 ntBASIC8.18□□□□□ -1.1
TcraP01849 Gm7293-201ENSMUST00000216682 1007 ntBASIC8.18□□□□□ -1.1
TcraP01849 AC153962.4-201ENSMUST00000217878 242 ntBASIC8.18□□□□□ -1.1
TcraP01849 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.18□□□□□ -1.1
TcraP01849 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.18□□□□□ -1.1
TcraP01849 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.18□□□□□ -1.1
TcraP01849 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
TcraP01849 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Gm19221-201ENSMUST00000221827 1477 ntBASIC8.18□□□□□ -1.1
TcraP01849 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TcraP01849 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.18□□□□□ -1.1
TcraP01849 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TcraP01849 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.18□□□□□ -1.1
TcraP01849 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.18□□□□□ -1.1
TcraP01849 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TcraP01849 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Gm43817-201ENSMUST00000196459 2262 ntBASIC8.17□□□□□ -1.1
TcraP01849 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TcraP01849 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TcraP01849 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms