Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm38151-201ENSMUST00000195085 289 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hcn1O88704 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hcn1O88704 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.79□□□□□ -0.68
Hcn1O88704 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.78□□□□□ -0.68
Hcn1O88704 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Erich3-203ENSMUST00000189969 3460 ntBASIC10.78□□□□□ -0.68
Hcn1O88704 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Hcn1O88704 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.78□□□□□ -0.68
Hcn1O88704 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hcn1O88704 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm43947-201ENSMUST00000203019 959 ntBASIC10.78□□□□□ -0.68
Hcn1O88704 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.78□□□□□ -0.68
Hcn1O88704 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.78□□□□□ -0.68
Hcn1O88704 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Hcn1O88704 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
Hcn1O88704 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hcn1O88704 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hcn1O88704 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.77□□□□□ -0.68
Hcn1O88704 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Hcn1O88704 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Hcn1O88704 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.77□□□□□ -0.68
Hcn1O88704 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hcn1O88704 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hcn1O88704 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Hcn1O88704 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.77□□□□□ -0.69
Hcn1O88704 Gm11960-201ENSMUST00000122068 925 ntBASIC10.77□□□□□ -0.69
Hcn1O88704 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.77□□□□□ -0.69
Hcn1O88704 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.77□□□□□ -0.69
Hcn1O88704 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.77□□□□□ -0.69
Hcn1O88704 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hcn1O88704 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.77□□□□□ -0.69
Hcn1O88704 Gm3786-201ENSMUST00000202659 378 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms