Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp9yF8VPU6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp9yF8VPU6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp9yF8VPU6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm6238-201ENSMUST00000120999 465 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm8163-201ENSMUST00000122020 1060 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm11960-201ENSMUST00000122068 925 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm19246-201ENSMUST00000173599 255 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 AC155293.1-201ENSMUST00000219793 1026 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 AC159196.1-201ENSMUST00000225524 377 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm12745-201ENSMUST00000121767 214 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm19927-201ENSMUST00000185792 781 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm37597-201ENSMUST00000191853 382 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Ighv1-8-201ENSMUST00000192236 293 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm7210-201ENSMUST00000209309 1067 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm8960-201ENSMUST00000219787 788 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp9yF8VPU6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm7790-201ENSMUST00000118716 1310 ntBASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Gm22341-201ENSMUST00000083775 129 ntBASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp9yF8VPU6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms