Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm15617-201ENSMUST00000118973 771 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm22119-201ENSMUST00000175594 99 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm7584-201ENSMUST00000175829 940 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm37259-201ENSMUST00000193903 849 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm22323-201ENSMUST00000103832 109 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm12857-201ENSMUST00000117678 592 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm22846-201ENSMUST00000157706 270 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm26361-201ENSMUST00000158868 186 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Olfml3-204ENSMUST00000169286 874 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm25890-201ENSMUST00000177643 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm25700-201ENSMUST00000177693 110 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm22614-201ENSMUST00000178300 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm28686-201ENSMUST00000187404 609 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm17812-201ENSMUST00000204935 318 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm44967-201ENSMUST00000207047 631 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm6722-201ENSMUST00000221586 390 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms