Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Timp4Q9JHB3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Mir1905-201ENSMUST00000122779 82 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm16165-201ENSMUST00000160140 795 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Mir7035-201ENSMUST00000184713 82 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm44216-201ENSMUST00000203942 157 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Capsl-202ENSMUST00000226688 739 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm8181-201ENSMUST00000062242 669 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp4Q9JHB3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm13351-201ENSMUST00000118087 414 ntBASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm25830-201ENSMUST00000158923 132 ntBASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm24809-201ENSMUST00000175318 271 ntBASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp4Q9JHB3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms