Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.32□□□□□ -0.6
Cdk9Q99J95 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.32□□□□□ -0.6
Cdk9Q99J95 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.32□□□□□ -0.6
Cdk9Q99J95 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.32□□□□□ -0.6
Cdk9Q99J95 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.32□□□□□ -0.6
Cdk9Q99J95 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdk9Q99J95 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm12463-201ENSMUST00000118271 849 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm15547-201ENSMUST00000122152 333 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm3329-201ENSMUST00000159873 556 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm17376-201ENSMUST00000166016 84 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm4857-201ENSMUST00000192718 785 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm5455-201ENSMUST00000058710 715 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.31□□□□□ -0.6
Cdk9Q99J95 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdk9Q99J95 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms