Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.62□□□□□ -0.71
Rfwd3Q8CIK8 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm11949-201ENSMUST00000117640 372 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm14263-201ENSMUST00000117955 746 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm14585-201ENSMUST00000120713 634 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm43916-201ENSMUST00000205062 967 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm5996-201ENSMUST00000211110 718 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfwd3Q8CIK8 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm15615-201ENSMUST00000118876 198 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm15549-201ENSMUST00000121595 622 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm43947-201ENSMUST00000203019 959 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm17825-201ENSMUST00000206836 794 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Gm5451-201ENSMUST00000080545 579 ntBASIC10.6□□□□□ -0.71
Rfwd3Q8CIK8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms