Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm23931-201ENSMUST00000103842 109 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Mospd4-201ENSMUST00000180618 576 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm19994-201ENSMUST00000217086 586 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Lect2-202ENSMUST00000225183 823 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.65□□□□□ -0.71
Rnf220Q6PDX6 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm13829-201ENSMUST00000119600 138 ntBASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm38158-201ENSMUST00000194617 339 ntBASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rnf220Q6PDX6 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.63□□□□□ -0.71
Rnf220Q6PDX6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms